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    Overall protocol for top-down CZE-MS/MS of human heart tissue

    Jeannie Camarillo, Bryon Drown, Neil Kelleher

    Published: 2022-03-04 DOI: 10.17504/protocols.io.b5seq6be
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    Abstract

    Overview description of the process for acquiring top-down CZE-MS/MS data on human heart tissue

    Steps

    Tissue Collection

    1.

    Heart tissue was provided by University of Washington. Tissue was collected and prepared according to the following:

    Protocol for Tissue Collection from Organ Procurement Organization

    Sample Preparation

    2.

    Perform LC based Proteomics on adjacent tissue sections:

    Tissue Homogenization and GELFrEE for Top-Down Proteomics

    Data Acquisition

    3.

    Untargeted Top-down Proteomics by CZE-MS/MS on Eclipse

    4.

    Top-down proteomics data analysis on the NRTDP TDPortal

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